Sam Isaacson

Results 506 comments of Sam Isaacson

FWIW, everything passes and builds locally for me.

One thing we can really show over other packages is the ability to have a breadth of parameter estimation approaches using SciML tooling (maybe model component discovery too?). We should...

We should add a set of tutorials for Julia "beginners", for whom using Catalyst is one of their first Julia uses (I think we get a decent number of such...

Those sound good. The idea is the tutorials should explain basic Julia ideas as they go assuming little familiarity (like tuples vs. vectors for initial conditions, what a `Pair` is,...

First a caveat; my comments were at the level of `ReactionSystem` and the `Reaction`s it stores -- I'm more thinking about how we should encode this at the MT system...

I'd like to keep `ReactionSystem`s as generic as possible, and leave any lowering / processing to occur within them (and not at the DSL level). This keeps a symbolic and...

Thanks for the comments. The issue I had when I took a look at this is that MT doesn’t currently work with a probability distribution from distributions.jl in it (it...

Maybe we can just register those distributions, I’ll have to check that.

We also should probably have a way to propagate RNG choice when the distribution is ultimately replaced with a call to `rand`.

I think we've handled the original issue here, but we could open a new issue if the current support is not general enough.