PATO
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load_gff_list() does not like special characters in names
I was processing a few genome datasets, which included some spaces in the naming of files. Now, I know unix based systems does not generally like spaces and/or special characters in files, and maybe it is dir() fault in not backslashing spaces ad others special characters, just thought to share what happenes with me.
load_gff_list():
gffs <- load_gff_list(gff_files) sh: 1: Syntax error: "(" unexpected
and then it tries to find the files anyway, and errors again:
Error in { : task 1 failed - "Cannot find /tmp/Rtmp33fvXM/gffTMP50ee4cbcabd9.fasta, please correct path and/or file name"
Anyways, cheers