slamdunk

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HI Tobias,

I find the range of y axis value changes automatically depending on the range of value, when I run "alleyoop utrrates" command. Could you let me know how I can change y axis values manually?

Thank you.

Hi,

yes that is how it is currently implemented and I have yet to add a parameter to set this range manually.

However, for the MultiQC report you can create for all samples in a run, you will have a common scale for all - would this help as a workaround in the meanwhile?

Cheers

Thank you for a quick answer. I have tried multiqc to create utrrate comparison however it showed this warning message " multiqc : No analysis results found. Cleaning up.." and didn't generate report. Since multiqc worked well for overrallrates comparison, I don't think there was a problem during installation. Could you let me know if you have any idea how to fix this problem?

Hm can you look at the mutationrates_utr.csv files and check if there is some actual content inside?