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Published 20 hours ago • verified publisher icon shenwei356

Genbank to fasta?

Open MostafaYA opened this issue 1 year ago • 2 comments

Prerequisites

  • [ ] make sure you're are using the latest version by seqkit version
  • [ ] read the usage

Describe your issue

Hi, Would seqkit may be support the conversion of genbank / embl file into fasta format? Thanks

  • [ ] describe the problem
  • [ ] provide a reproducible example

MostafaYA avatar Dec 07 '23 17:12 MostafaYA

You might try this: https://github.com/tseemann/any2fasta

shenwei356 avatar Dec 07 '23 19:12 shenwei356

I am aware of it. I thought it might be easy to have this implemented in seqkit as a new subcommand, so that I have all what I need in this tool!

MostafaYA avatar Dec 07 '23 20:12 MostafaYA