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Published
20 hours ago •
rstudio
rstudio
Using paletteer in data_color has name conflicts
Description
When using paletteer inside data_color() there is a potential for name conflict, specifically when type is a column within the underlying dataframe it is interpreted within the context of the dataframe inside paletteer functions that AFAIK shouldn't be accessing/referncing the underlying data. As discovered in gtExtras Issue 50
Reproducible example
library(gt)
base_gt <- dplyr::tibble(
"name" = c("A", "B", "C"),
type = c("a", "b", "c"),
value = c(0.1, 0.6, 0.9)
) %>%
gt()
# type is not present in the global env
type
#> Error in eval(expr, envir, enclos): object 'type' not found
# evaluates type from the underlying dataframe
base_gt %>%
data_color(
columns = value,
colors = scales::col_numeric(
palette =
paletteer::paletteer_d(
palette = "ggsci::red_material",
type = type
) %>% as.character(),
domain = c(0,1)
)
)
#> Error in match.arg(type): 'arg' must be of length 1
# allows for operations on type, where type == "a"
# so it throws an error not matching discrete or continuous
base_gt %>%
data_color(
columns = value,
colors = scales::col_numeric(
palette =
paletteer::paletteer_d(
palette = "ggsci::red_material",
type = type[1]
) %>% as.character(),
domain = c(0,1)
)
)
#> Error in match.arg(type): 'arg' should be one of "discrete", "continuous"
Created on 2022-05-23 by the reprex package (v2.0.1)
Session info
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#> setting value
#> version R version 4.2.0 (2022-04-22)
#> os macOS Monterey 12.2.1
#> system aarch64, darwin20
#> ui X11
#> language (EN)
#> collate en_US.UTF-8
#> ctype en_US.UTF-8
#> tz America/Chicago
#> date 2022-05-23
#> pandoc 2.18 @ /Applications/RStudio.app/Contents/MacOS/quarto/bin/tools/ (via rmarkdown)
#>
#> ─ Packages ───────────────────────────────────────────────────────────────────
#> package * version date (UTC) lib source
#> assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.2.0)
#> backports 1.4.1 2021-12-13 [1] CRAN (R 4.2.0)
#> checkmate 2.1.0 2022-04-21 [1] CRAN (R 4.2.0)
#> cli 3.3.0 2022-04-25 [1] CRAN (R 4.2.0)
#> colorspace 2.0-3 2022-02-21 [1] CRAN (R 4.2.0)
#> crayon 1.5.1 2022-03-26 [1] CRAN (R 4.2.0)
#> DBI 1.1.2 2021-12-20 [1] CRAN (R 4.2.0)
#> digest 0.6.29 2021-12-01 [1] CRAN (R 4.2.0)
#> dplyr 1.0.8 2022-02-08 [1] CRAN (R 4.2.0)
#> ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.2.0)
#> evaluate 0.15 2022-02-18 [1] CRAN (R 4.2.0)
#> fansi 1.0.3 2022-03-24 [1] CRAN (R 4.2.0)
#> fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.2.0)
#> fs 1.5.2 2021-12-08 [1] CRAN (R 4.2.0)
#> generics 0.1.2 2022-01-31 [1] CRAN (R 4.2.0)
#> ggplot2 3.3.5 2021-06-25 [1] CRAN (R 4.2.0)
#> glue 1.6.2 2022-02-24 [1] CRAN (R 4.2.0)
#> gt * 0.5.0.9000 2022-05-20 [1] Github (rstudio/gt@e6a762f)
#> gtable 0.3.0 2019-03-25 [1] CRAN (R 4.2.0)
#> highr 0.9 2021-04-16 [1] CRAN (R 4.2.0)
#> htmltools 0.5.2 2021-08-25 [1] CRAN (R 4.2.0)
#> knitr 1.38.3 2022-04-26 [1] Github (yihui/knitr@87e5d8e)
#> lifecycle 1.0.1 2021-09-24 [1] CRAN (R 4.2.0)
#> magrittr 2.0.2 2022-01-26 [1] CRAN (R 4.2.0)
#> munsell 0.5.0 2018-06-12 [1] CRAN (R 4.2.0)
#> paletteer 1.4.0 2021-07-20 [1] CRAN (R 4.2.0)
#> pillar 1.7.0 2022-02-01 [1] CRAN (R 4.2.0)
#> pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.2.0)
#> purrr 0.3.4 2020-04-17 [1] CRAN (R 4.2.0)
#> R.cache 0.15.0 2021-04-30 [1] CRAN (R 4.2.0)
#> R.methodsS3 1.8.1 2020-08-26 [1] CRAN (R 4.2.0)
#> R.oo 1.24.0 2020-08-26 [1] CRAN (R 4.2.0)
#> R.utils 2.11.0 2021-09-26 [1] CRAN (R 4.2.0)
#> R6 2.5.1 2021-08-19 [1] CRAN (R 4.2.0)
#> rematch2 2.1.2 2020-05-01 [1] CRAN (R 4.2.0)
#> reprex 2.0.1 2021-08-05 [1] CRAN (R 4.2.0)
#> rlang 1.0.2 2022-03-04 [1] CRAN (R 4.2.0)
#> rmarkdown 2.14 2022-04-25 [1] CRAN (R 4.2.0)
#> rstudioapi 0.13 2020-11-12 [1] CRAN (R 4.2.0)
#> scales 1.2.0 2022-04-13 [1] CRAN (R 4.2.0)
#> sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.2.0)
#> stringi 1.7.6 2021-11-29 [1] CRAN (R 4.2.0)
#> stringr 1.4.0 2019-02-10 [1] CRAN (R 4.2.0)
#> styler 1.7.0 2022-03-13 [1] CRAN (R 4.2.0)
#> tibble 3.1.6 2021-11-07 [1] CRAN (R 4.2.0)
#> tidyselect 1.1.2 2022-02-21 [1] CRAN (R 4.2.0)
#> utf8 1.2.2 2021-07-24 [1] CRAN (R 4.2.0)
#> vctrs 0.4.1 2022-04-13 [1] CRAN (R 4.2.0)
#> withr 2.5.0 2022-03-03 [1] CRAN (R 4.2.0)
#> xfun 0.30 2022-03-02 [1] CRAN (R 4.2.0)
#> yaml 2.3.5 2022-02-21 [1] CRAN (R 4.2.0)
#>
#> [1] /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library
#>
#> ──────────────────────────────────────────────────────────────────────────────
Expected result
I would expect type to not be evaluated within the context/environment of the underlying dataframe.
