Robert Castelo

Error on setting `seqlevelsStyle(gal) <- "RefSeq"`

4

hi, setting `seqlevelsStyle()` to `RefSeq` works for, e.g., `TxDb` objects, but it gives an error with `GenomicAlignment` objects. Here is a minimal repex: ```r library(GenomicAlignments) library(TxDb.Hsapiens.UCSC.hg38.knownGene) txdb

Retrieving older annotations while matching API version

14

Hi, I'm tryting to build an EnsDb annotation package for an old version of the human annotations (74) for a purpose of trying to fully reproduce some result, but I'm...

Missing data policy for ssGSEA, as per feature request in #168, it resolves #174. Checking for the presence of missing (`NA`) values is done through the function `anyNA()`. By default,...

The current implementation of ssGSEA propagates missing (`NA`) values to the result. In the context of proteomics data, as illustrated in #168, it may become useful to have a missing...

Dear @xriley [Quarto websites](https://quarto.org) are a way to build websites using [quarto documents](https://r4ds.hadley.nz/quarto), which are a great way to produce content that combines text and executable code (R or Python)....