pveber

Is there something I can do to help push this PR forward?

I have also seen this problem, but after installing (like in `jbuilder install`) `iocaml-kernel` (from @rgrinberg's `jbuilder` branch), the compilation goes further. The next problem I see is: ``` ocamlopt...

You should create one branch per topic, one for blast the other for the fix on prokka, push both branches to your github depo, and create a new pull request...

I meant setting the name of the created container, not the name of the images.

in particular, download of singularity images should be flagged as requiring bandwidth

[This](https://gist.github.com/codeinthehole/7ea69f8a21c67cc07293) could help

Is there any problem holding the PR back? It should make quite a difference on the estimated footprint.

I confirm there is still a problem in current master (9ddacb0). Using the following SAM input file: ``` FCC5W8BACXX:1:1101:16503:36846#ATCCAAGC/2 16 chr2L 22700622 44 100M * 0 0 CGAGATCAACGCACAACTCGAGGTCGAAATCGAATTCGGCAAAAGACGACTTCGCATAAACATCCTAATACTACCAGGGGTGGAATTTCCTCACCCCGAA ^b`_YJTG[ab^YSGS]a^Ya^^[X]_]]ca_\V^cdcdeedddef_\Zeabgggcfbgece_aaehgcaaaYdffaghgbfde_^cgeebWO`ccc__^ AS:i:200...

Same problem here. I think this is related to the function `Pkg.dune_project_name`, see that snippet: ```ocaml Bos.OS.File.read_lines file >>| fun lines -> List.fold_left (fun acc line -> (* sorry *)...

ping @pmelsted I can imagine everybody is busy, just wanted to stress the bug here is both serious for any downstream use of bootstrap distributions, and rather easy to fix...