ont-assembly-snake
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pmenzel
Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools
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ont-assembly-snake issues
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https://github.com/ythuang0522/homopolish#quick-usage-for-polishing-modification-errors however, there is an issue with installing homopolish v0.4.1 via bioconda. when using https://github.com/ythuang0522/homopolish/blob/master/environment.yml (+ homopolish itself) via conda, it fails on libffi.so.6, which might not be available in...
https://github.com/morispi/CONSENT https://www.nature.com/articles/s41598-020-80757-5