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Published 20 hours ago • verified publisher icon frankkramer-lab

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Open 10TREE-YEAR opened this issue 4 years ago • 1 comments
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Hello, I would like to ask you, what kind of running program do you use? I ran on the server and trained 5 times for 3 days. The speed is too slow, and you trained 1000 times, so can you tell me what you used to run the program method.

10TREE-YEAR avatar Dec 04 '20 12:12 10TREE-YEAR

Hello @10TREE-YEAR,

can you specify what you mean with running program?

The script, which we used to generate the results of this paper, is located under scripts/run_miscnn.py As a GPU, we utilized a NVIDIA QUADRO RTX 6000.

Training time was less than 2 days per fold. If you didn't change anything in the hyperparameters of this script, then it's probably your hardware. I guess, either GPU or CPU bottleneck. Required RAM is less than 20GB and required GPU VRAM less than 17GB.

Cheers, Dominik

muellerdo avatar Dec 07 '20 16:12 muellerdo