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PPI analysis using STRING R package

Open sreichl opened this issue 2 years ago • 0 comments

  • code in macroStim project
  • apply to all provided gene sets (e.g., up regulated)
  • or go beyond and implement "network-based" enrichment analysis using e.g., OMNIPATH testing if genes are closer in the network than random chance / background gene set of expressed genes

sreichl avatar Sep 02 '23 16:09 sreichl