antiberty-pytorch
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snakemake download not successful
[Tue Dec 3 08:51:42 2024] localrule download: output: sequences/ERR3664756_Heavy_IGHG.list jobid: 169 reason: Missing output files: sequences/ERR3664756_Heavy_IGHG.list wildcards: filename=ERR3664756_Heavy_IGHG resources: tmpdir=/tmp
gzip: stdin: unexpected end of file [Tue Dec 3 08:51:44 2024] Error in rule download: jobid: 169 output: sequences/ERR3664756_Heavy_IGHG.list shell: wget -qO- http://opig.stats.ox.ac.uk/webapps/ngsdb/unpaired/Bender_2020/csv/ERR3664756_Heavy_IGHG.csv.gz | gunzip -c | tail -n+3 | cut -d, -f1 > sequences/ERR3664756_Heavy_IGHG.list (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)
Removing output files of failed job download since they might be corrupted: sequences/ERR3664756_Heavy_IGHG.list Shutting down, this might take some time. Exiting because a job execution failed. Look above for error message Complete log: .snakemake/log/2024-12-03T085136.348937.snakemake.log WorkflowError: At least one job did not complete successfully.