David Doty
David Doty
Currently, the main features of scadnano are documented in the README, and several features that have been added since that was updated are scattered across GitHub release notes. Create a...
In particular, regularly spaced ticks should be re-adjusted to start at the new min_offset.
When the Selection Mode is domains, Select All (Ctrl+A) should select all domains, but it does not. Fix this.
The [built_value](https://pub.dev/packages/built_value) and [built_collection](https://pub.dev/packages/built_collection) packages are used in scadnano for immutable objects. However, because it uses code generation at compile time, due to the huge number of built_value objects (both...
This issue fixed the problem before we had helix groups: #276 Now, some helices might be selected, but none in the current helix group. So this warning should be updated...
See also UC-Davis-molecular-computing/scadnano-python-package#196. This tool looks better than what we are using now, for instance: https://github.com/github-tools/github-release-notes For one, it uses the commit description, not only the message/title. It also can...
See https://github.com/UC-Davis-molecular-computing/scadnano-python-package/issues/248.
Support exporting to Bioneer format, e.g., https://us.bioneer.com/store/OligoPlateFileOrder.aspx See https://github.com/UC-Davis-molecular-computing/scadnano-python-package/issues/239
cadnano shows potential crossover positions where the DNA backbones are most aligned, and offers users a one-click option to add a half-crossover at that position. scadnano should have a similar...
Currently internal DNA modifications can only be displayed if they are on a Domain. Support storing and displaying them on Loopouts and Extensions also.