LOLAweb

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Universal Analytics is being deprecated July 2023, which requires our tracking and tags be updated to GA4. https://support.google.com/analytics/answer/11583528

nmagee

setup instructions incomplete

2

in the readme there is not described where to download the regionDBs. if i want to download the core package which files should one download, how should the folder structure...

malger

Is the user expected to add a window around her peaks?

4

Co-localization/enrichment relies on some defined proximity window. But since the UI does not expose any such window-size, I'm wondering if we have to expand the query sets (e.g. macs2 peaks...

holgerbrandl

API

2

Thanks for this, looks great! Don't know if you guys want to go that way but I think it would be terrific it LOLAweb would allow programmatic access through something...

afrendeiro

mm10 example region set and mm9 example universe

9

i'm seeing that the pre-loaded region set for mm10 is empty ... as is universe select list for mm9

vpnagraj

make all reference data available and document local setup

6

since the `universes` and `regionDBs` have outgrown what is in [lola vignette data](http://cloud.databio.org/vignettes/), i think we should consider where and how to make all the reference data (and sample caches)...

vpnagraj

two previous issues have been raised (#82 and #88 ) that speak to the need for LOLAweb to be able to more intelligently check whether or not the processing is...

vpnagraj

one-container limitation

10

the current implementation has this limitation we've discussed: because a user is linked to a specific container, if I try to run two tabs with LOLAweb at the same time,...

nsheff

processing time streamlined

13

If we can load all the libraries in a global area, then what stops us from also doing this with the database caches, so they don't need to be re-loaded...

nsheff

feedback link

1

should we add a link to collect feedback/ suggestions/problems with lolaweb?

nsheff