Krishna Udaiwal
Krishna Udaiwal
"'plan specification' and 'executed by' some (~~assay~~ 'planned process' and 'has specified input' some 'generically dependent continuant') 'planned process' is sufficient IMO, where assay (subclass of 'planned process') requires some...
If there aren't any issues from @ddooley or from one of the other RO experts, I think this term can be moved with the added definition. In which case, I...
> I think COB would want to take on the "planned process" executes some "plan specification" axiom BECAUSE its in the definition of planned process?! (Also planned processes execute protocols,...
I would agree it does somewhat fit the 'Agronomy' part of this ontology, but the decision would be falling on whether @celineaubert or @marieALaporte agree?
There is a parsing error I'll have to fix before next release (there is a problem triple). for the time being, a converted obo file is available here: https://github.com/KrishnaTO/agro/blob/master/agro.obo
Creating a csv report on useful terms seems exactly what ENVO does using SPARQL reports creation pipeline, linked in #10 and https://github.com/AgriculturalSemantics/agro/issues/10#issuecomment-223766814 > Since the "subset reports" will be SPARQL-driven,...
Terms mapped to Agrovoc: https://github.com/KrishnaTO/biomappings/blob/curate-agro-agrovoc-mappings/src/biomappings/resources/mappings.tsv Need to determine method of import
Assuming you'd like to continue the plan to move terms to ENVO (requesting confirmation @pbuttigieg due to stale issue), need to determine which terms require moving. For reference: https://www.ebi.ac.uk/ols/ontologies/agro/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FENVO_00010483 -...
R-script for getting duplicates, using the [BioPortal/AGRO](https://bioportal.bioontology.org/ontologies/AGRO/) csv file download. File: [getduplicatesfromcsv](https://github.com/AgriculturalSemantics/agro/files/7524140/getduplicatesfromcsv.txt) Preferred.Label | Class.ID -- | -- agricultural process | http://purl.obolibrary.org/obo/ENVO_01001246 agricultural process | http://purl.obolibrary.org/obo/AGRO_00002071 anatomical entity | http://purl.obolibrary.org/obo/CARO_0000000...
Likely have to investigate duplicate entries in UO: Preferred.Label | Class.ID -- | -- micromole | http://purl.obolibrary.org/obo/UO_0010048 micromole | http://purl.obolibrary.org/obo/UO_0000039 milli | http://purl.obolibrary.org/obo/UO_0010009 milli | http://purl.obolibrary.org/obo/UO_0000297