SiamDiff
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DeepGraphLearning
Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)
Hi there, I recently came across your work and was intrigued by the approach and findings. It's great that you've open-sourced the code. I noticed using GVP as the backbone...
Dear Sir/Madam, Thank you for such a great repo, but I am confused by the result for EC downstream task result. The result of multiview contrast in paper "PROTEIN REPRESENTATION...
Hi, I have a question about the time encoding. As DiffPreT is trained like a diffusion model, does the backbone network GearNet explicitly encode the time step?
Hi, I have a question about the RES task. For each example, the subunit indices contain atoms and residues from different chains of the protein. Do you just treat them...
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Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)