load harmonized embeddings into harmony object for use with Symphony

[hbandukw]

Hello,

I have an atlas that was produced by integrating data with Harmony. I want to use the integrated data with Symphony's mapQuery function. The recommended option i.e. Option 1 listed on https://github.com/immunogenomics/symphony starts with an existing harmony object which is then used to make a Symphony reference using buildReferenceFromHarmonyObj.

I currently have the harmonized embeddings integrated into a .h5seurat file. Is there a way I can extract the necessary components from this file and load them into R as a harmony object?