i alarmed alien
i alarmed alien
As part of KBase's work with ontologies in semsql, it would be very handy to be able to export as DSV directly, rather than going via the sqlite database. We...
Fixes linkml/linkml#258. Adding in the new w3curie type. I tried to update the repo to use py3.12 with the current versions of linkml, linkml-runtime, and pyyaml so that I could...
upstream_repo: dalito/linkml upstream_branch: issue2578-fix-uri-in-snapshot Note: upstream tests will fail until https://github.com/linkml/linkml/pull/2648 is merged, which relies on a new release of linkml-runtime being made. ---- I have a minor change to...
It's extremely easy to add a class, enum, or type as a range without that class, enum, or type being defined elsewhere in the schema. The resulting error when you...
Has anyone undertaken a mapping of ECO to the set of evidence codes used by [RegulonDB](https://regulondb.ccg.unam.mx)? RegulonDB [evidence code documentation](https://regulondb.ccg.unam.mx/manual/help/evidenceclassification) and [publication](https://pmc.ncbi.nlm.nih.gov/articles/PMC3548332/) The evidence codes themselves: - [evidence set](https://regulondb.ccg.unam.mx/datasets/browser/RDBECOLIDLF00013) -...
It is possible to create an invalid `induced_slot` by supplying an incorrect class/slot pairing, i.e. a slot or attribute that does not appear on class or any of its ancestors....
Not sure if this is a bug or a feature, but it should be documented. If you are using `prefix` and have your routes spread across several packages, you need...