Jason Stajich
Jason Stajich
It works for me installed from GitHub. Have you done that? We haven’t made a new release. On Mon, Feb 20, 2023 at 11:09 AM Hassan Tarabai ***@***.***> wrote: >...
but it would be helpful to get the latest ucsc-pslcdnafilter installed too so still need to figure out this conda dependency problem...
you can put these links into any folder you have permission and just make sure your $LD_LIBRARY_PATH has that folder in it. but you can install the ssl library to...
We are aware. Thanks for sending in the note. Future versions will switch to that software as the generator of sqn files. On Wed, May 10, 2023 at 5:49 AM...
not sure if this kept the table2asn bioconda recipe I had worked on in May and was attempting to get into the system too. but hope it was all working...
it would help if you can provide the cmdline options you are asking to be generated -- I think at one point we explored this but I am not sure...
I've found this to happen in some large genomes I was working with too - though i cannot totally link it to specific issues - I suspect EVM is to...
The honest answer is it depends. On the size of genome, proteome and transcript files. The training step will be memory intensive if you have large amounts of rnaseq. This...
It's something I can try to provide to reproduce but otherwise I would only need 24-32gb ram for the job but need 128+. I can setup some tests. It had...
did you run funannotate 'predict' already and there are no errors with that?