Different stats for protein mode

[arslan9732]

Hi, I ran compleasm and BUSCO using protein mode on my annotated genome. Compleasm's result is not good. Is there a change in your hmmsearch or something else? Here are the results:

Compleasm:

S:74.25%,1727
D:20.42%, 475
F:1.98%, 46
M:3.35%, 78
N: 2326

BUSCO

 C:95.3%[S:84.3%,D:11.0%],F:1.2%,M:3.5%,n:2326
        2216    Complete BUSCOs (C)
        1961    Complete and single-copy BUSCOs (S)
        255     Complete and duplicated BUSCOs (D)
        29      Fragmented BUSCOs (F)
        81      Missing BUSCOs (M)
        2326    Total BUSCO groups searched