Inference speed

Open llwx593 opened this issue 3 years ago • 1 comments

Hi, I try to run inference scripts using T1050.fasta(779 residues) on nvidia a100, the following table shows the in time.

Type	Inference time
FastFold	262.14789s
OpenFold	124.69651s

It's a little different from the data in the paper. I don't know whether it's normal. Thanks.

Jul 21 '22 08:07 llwx593

I think you can try the new code in main branch. Or you can send T1050.fasta to me, and I will have a performance test on our machines.

Jul 25 '22 03:07 Shenggan

We run T1050.fasta on single A100 (80 GB PCIe) with new code in main branch (9ab281fea) , inference time of fastfold is 65.22272s. Here is the log: inference-only.log

Issue closed, you can reopen this issue if you have further performance issues.

Sep 15 '22 07:09 Shenggan