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Error in `check_breaks_labels()`: `upset()` now fails basic ggplot2 checks

Open smped opened this issue 2 years ago • 0 comments

I fear that this may be the end of UpSetR's compatibility with external packages. Plotting using fromList() no longer works and instead spits an error. Here's my Minimal Reprex

library(tidyverse)
library(UpSetR)
ex <- list(x = letters[1:10], y = letters[c(6:15, 26)],  z = letters[c(2, 10:25)])
df <- fromList(ex)
upset(df)
Error in `check_breaks_labels()`:
! `breaks` and `labels` must have the same length
Run `rlang::last_error()` to see where the error occurred.

Proceeding as advised

rlang::last_error()
<error/rlang_error>
Error in `check_breaks_labels()`:
! `breaks` and `labels` must have the same length
---
Backtrace:
 1. UpSetR::upset(df)
 2. UpSetR:::Make_matrix_plot(...)
 3. ggplot2::scale_y_continuous(...)
 4. ggplot2::continuous_scale(...)
 5. ggplot2:::check_breaks_labels(breaks, labels)
Run `rlang::last_trace()` to see the full context.

And the sessionInfo() output

sessionInfo()
R version 4.2.1 (2022-06-23)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 20.04.4 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0

locale:
 [1] LC_CTYPE=en_AU.UTF-8       LC_NUMERIC=C               LC_TIME=en_AU.UTF-8        LC_COLLATE=en_AU.UTF-8     LC_MONETARY=en_AU.UTF-8    LC_MESSAGES=en_AU.UTF-8   
 [7] LC_PAPER=en_AU.UTF-8       LC_NAME=C                  LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] UpSetR_1.4.0    forcats_0.5.1   stringr_1.4.0   dplyr_1.0.9     purrr_0.3.4     readr_2.1.2     tidyr_1.2.0     tibble_3.1.7    ggplot2_3.3.6   tidyverse_1.3.1

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.8.3     plyr_1.8.7       cellranger_1.1.0 pillar_1.7.0     compiler_4.2.1   dbplyr_2.1.1     tools_4.2.1      digest_0.6.29    jsonlite_1.8.0   lubridate_1.8.0 
[11] lifecycle_1.0.1  gtable_0.3.0     pkgconfig_2.0.3  rlang_1.0.2      reprex_2.0.1     rstudioapi_0.13  DBI_1.1.2        cli_3.3.0        haven_2.5.0      gridExtra_2.3   
[21] xml2_1.3.3       withr_2.5.0      httr_1.4.3       fs_1.5.2         generics_0.1.2   vctrs_0.4.1      hms_1.1.1        grid_4.2.1       tidyselect_1.1.2 glue_1.6.2      
[31] R6_2.5.1         fansi_1.0.3      readxl_1.4.0     farver_2.1.0     tzdb_0.3.0       modelr_0.1.8     magrittr_2.0.3   backports_1.4.1  scales_1.2.0     ellipsis_0.3.2  
[41] rvest_1.0.2      assertthat_0.2.1 colorspace_2.0-3 labeling_0.4.2   utf8_1.2.2       stringi_1.7.6    munsell_0.5.0    broom_0.8.0      crayon_1.5.1    

smped avatar Jul 26 '22 04:07 smped