pyboolnet
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hklarner
PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.
I just upgraded to version 3.0.11 on Linux and got an error because gringo and clasp could not be found. It looks like `binaries/linux64/settings.cfg` expects them to be packaged with...
Heyyo! I'm a grad student wanting to use PyBoolNet for a school project, and I have had a rough time installing PyBoolNet. I use Windows 10. I have uninstall and...
Apologies for the mess of code but I thought it would be better to keep my troubleshooting in for clarity I have a bnet file however I am finding it...
Makes debugging BN files much easier as you can print the exception
In this package `igraph` is used to mean "interaction graph", however, [igraph](https://igraph.org/) is also a very popular graph analysis tool in Python (also R, Mathematica, and C++ ), with similarities...
Python 3.11 removed the (long) deprecated inspect.getargspec This commit replaces the call with the recommended getfullargspec
it seems that the initial states are computed incorrectly as being all states, when the CTL spec is true everywhere. minimal example: ``` primes = PyBoolNet.Repository.get_primes("raf") update = "asynchronous" init...
Hi, I'm using 3.0.14 on Apple M1 hardware with Python 3.8.10 virtual environment. I'm experiencing sporadic but frequent hangs. When debugging the code, it appears that the hang results from...
