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Published 20 hours ago • verified publisher icon hildebra

Merging results from two lotus2 runs

Open Amanda-Biocortex opened this issue 6 months ago • 1 comments

Hi,

I have data from 3 projects that I would like to compare. The methods were very similar but error rate liley vary, hence I would like to run them through lotus2 (particularly the error rate calculation of DADA2) separately.

Is there a way of running the 3 project separately through lotus2-DADA2 and lotus2-Lambda, and then combining the results at the end? If I was using DADA2 in R I would use mergeSequenceTables, is there something similar I can do in lotus2 so that I can analyse all the data together?

Amanda-Biocortex avatar Aug 01 '24 15:08 Amanda-Biocortex