scRNA.seq.course
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Notes from Berlin
- spend more time on last 3 days and less on processing raw reads differential isoform analysis? minimum # reads per cell umi-counting with kallisto how to aggregate umis from transcripts to genes Practicals to add: slalom, RNA velocity, dropEST, UMI-tools, BEARscc, Libinorm, Cell-cycle analysis Drop-seq pipeline imputation: when is zero really a zero?
Thanks for your advice ~!