snpedia-23andme icon indicating copy to clipboard operation
snpedia-23andme copied to clipboard

Analyse a genome file from 23andMe using the data on snpedia.com

snpedia-23andme

Please note: This code is old and has probably ceased to work. For alternatives, check out e.g., r/slatestarcodex on Reddit.

Find health information from 23andMe's raw data.

The command

  ./snpedia-23andme.py [23andMe-genome-file]

reads 23andMe-genome-file, downloads the SNP information from that file from SNPedia and saves it in the zip file snpedia-archive.zip, to put less strain on SNPedia in case of multiple runs. Then outputs a list of all SNP genotypes sorted according to SNPedia's magnitude scale.