scRNA-seq_online

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algorithm theory

1

Add more links and Resources? In description of the course, discuss about course as more practical considerations not in-depth in algorithm theory

mistrm82

add an image to represent the Seurat object

1

this will be helpful in the first lesson to understand how the slots/layers work. Also, we can reference it in the cheatsheet

mistrm82

Trouble downloading ' scRNA-seq filtered counts' from the Pseudobulk DEG analysis tutorial

2

Hello, I am trying to go over downstream analysis following [pseudobulk DEG analysis tutorial page](https://hbctraining.github.io/scRNA-seq_online/lessons/pseudobulk_DESeq2_scrnaseq.html), and have trouble downloading the 'scRNA-seq filtered counts' data with the right click. May I...

yeseul830

Hi, I am having some difficulty understanding your elbow plot and how to choose the right principal component (PC) for downstream analysis as described in the following page: https://hbctraining.github.io/scRNA-seq/lessons/elbow_plot_metric.html On...

ptranvan

Update homework questions for day 1 and 2 from when we moved lessons around. Basically make sure that the questions are on lessons that are covered in the self-learning for...

nsohail19