kmers and counts

[marypiper]

trafficstars

Perhaps add a bit more information about the transcript output containing all transcripts in the transcriptome, but some will not be identified due to the fragment's length (300-500bp). Only those transcripts that are ~150bp more or less (150bp of transcript + adapters = 300-500bp fragment) should be detected. Therefore, the output should only have counts for transcripts >100+ bp.