Hina Bandukwala

Hello, I have an atlas that was produced by integrating data with Harmony. I want to use the integrated data with **Symphony's** _mapQuery_ function. The recommended option i.e. Option 1...

Hi, I am currently using SCENIC to identify some clusters and explore others in my data. I was wondering how to ask the right questions which could allow me to...

pySCENIC results in iRegulon doesn't return the same TFs

1

Hello, In order to explore the regulons identified in my data with pySCENIC, I used the list of target genes for select regulons and analyzed them using iRegulon. However, after...

Symphony labels when query is a negative control

5

Hello, I used Symphony to map two single-cell RNAseq queries to my harmony-integrated reference (made using the modular approach presented on Symphony Github). I used queries that were previously annotated...