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Is it possible to get 1) 95% confidence interval of time-dependent C-index and 2) calibration plot in Pycox package?

3

Hi, first of all, thank you so much for your great job! I have two requests in Pycox: 1) Is it possible to get 95% confidence interval of time-dependent C-index...

kyuchoi

Could you please tell me the pros and cons of your time-dependent C-index, compared to td AUC?

1

I want to use your timd-dependent C-index instead of time-dependent AUC. However, I could not tell what is the reason to use time-dependent C-index instead of time-dependent AUC, which seems...

kyuchoi

predict survival function

4

Hi Thanks for developing this package. It is really useful. In the "DeepHitSingle" class, What's the differences between "predict", "predict_surv", and "predict_surv_df"?

liguowang

time varying with Deep Learning

1

Are there any option to implement Deep Learning on time varying? Any notebook o code? Thanks!

PARODBE

How to provide the rank_mat for training deepHit model using the fit_dataloader()?

3

Hi, I am trying to use the deephit model from pycox with img as input and I get following error regarding rank_mat, with in the fit_dataloader() File "train.py", line 210,...

Rajshreed

How to feed the model multiple inputs?

1

Hi Havakv, thank you so much for your great work! I'd like to know how to feed the pycox model multiple inputs? Specifically, I want to use image and gene...

kyuchoi

error in Logistic Hazard Label transform

2

Hi! I have a very odd problem. I am trying to work with three different time-to-event variables and I am trying to discrete them. I am using this code based...

paulamartingonzalez

Is there any method or way to get hazard ratio?

6

We are using Pycox - CoxPH Model to find out hazard ratio of each genetic mutations. So, we put presence of each genetic mutations as 1 or 0 in x,...

inticoy

Time to event prediction using Graph Neural Networks

19

Hi! I am trying to extend the tutorials 3 and 4 to implement the Logistic Hazard loss in a Graph Neural Network for Graph-level prediction of survival. This is the[...

paulamartingonzalez

Predict log partial hazard

7

Hi, May I ask if there is a way to predict log partial hazard from DeepSurv or other models? Thanks,

Tran031194