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Published 20 hours ago • verified publisher icon happykhan

empty graph generated

Open AudreyBfr opened this issue 2 years ago • 3 comments

Hello, I have a problem running BRIG. I would like to compare 4 closed genomes but in contigs, and to plot the corresponding blast results. The process is running well without errors. And text files containing blast results are generated. And they look good. But nothing appears on the picture( DSM fna Here are the head of blast results files compressed for 1 rin head_I.fnaVsSpaced0DSM.fna.tab.txt head_Ring0merge.txt g

AudreyBfr avatar Jun 10 '22 09:06 AudreyBfr

Hi, were you able to solve this problem? I am currently having a similar challenge

maricleon avatar Nov 08 '22 15:11 maricleon

Hello,

No I never managed to solve my problem :( Sorry

Le 08/11/2022 16:59, Leon Maric a écrit :

Hi, were you able to solve this problem? I am currently having a similar challenge

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AudreyBfr avatar Nov 08 '22 16:11 AudreyBfr

Maybe this would help: https://www.researchgate.net/post/Why_does_BRIG_fail_to_create_rings_for_some_of_the_genomes

Seems like you need java 1.6 (read below)

maricleon avatar Nov 21 '22 15:11 maricleon