hapi-fhir-jpaserver-starter
hapi-fhir-jpaserver-starter copied to clipboard
Docker container does not start successfully with FHIR version DSTU2
Running:
docker run -ti --rm -p 8085:8080 -e hapi.fhir.fhir_version=dstu2 hapiproject/hapi:v5.7.0
Results in:
2022-03-16 11:40:22.396 [main] ERROR o.s.boot.SpringApplication [SpringApplication.java:819] Application run failed
org.springframework.context.ApplicationContextException: Unable to start web server; nested exception is org.springframework.boot.web.server.WebServerException: Unable to start embedded Tomcat
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.onRefresh(ServletWebServerApplicationContext.java:163)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:577)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.refresh(ServletWebServerApplicationContext.java:145)
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:730)
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:412)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:302)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1301)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1290)
at ca.uhn.fhir.jpa.starter.Application.main(Application.java:32)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:568)
at org.springframework.boot.loader.MainMethodRunner.run(MainMethodRunner.java:49)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:108)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:58)
at org.springframework.boot.loader.WarLauncher.main(WarLauncher.java:59)
Caused by: org.springframework.boot.web.server.WebServerException: Unable to start embedded Tomcat
at org.springframework.boot.web.embedded.tomcat.TomcatWebServer.initialize(TomcatWebServer.java:142)
at org.springframework.boot.web.embedded.tomcat.TomcatWebServer.<init>(TomcatWebServer.java:104)
at org.springframework.boot.web.embedded.tomcat.TomcatServletWebServerFactory.getTomcatWebServer(TomcatServletWebServerFactory.java:473)
at org.springframework.boot.web.embedded.tomcat.TomcatServletWebServerFactory.getWebServer(TomcatServletWebServerFactory.java:206)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.createWebServer(ServletWebServerApplicationContext.java:182)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.onRefresh(ServletWebServerApplicationContext.java:160)
... 16 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'hapiServletRegistration' defined in ca.uhn.fhir.jpa.starter.Application: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.boot.web.servlet.ServletRegistrationBean]: Factory method 'hapiServletRegistration' threw exception; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'ca.uhn.fhir.jpa.starter.JpaRestfulServer': Unsatisfied dependency expressed through field 'mdmProviderProvider'; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'mdmProviderLoader': Unsatisfied dependency expressed through field 'myMdmControllerHelper'; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'mdmProviderHelper' defined in class path resource [ca/uhn/fhir/jpa/mdm/config/MdmConsumerConfig.class]: Unsatisfied dependency expressed through method 'mdmProviderHelper' parameter 2; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mdmSettings' defined in class path resource [ca/uhn/fhir/jpa/starter/mdm/MdmConfig.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [ca.uhn.fhir.mdm.api.IMdmSettings]: Factory method 'mdmSettings' threw exception; nested exception is ca.uhn.fhir.context.ConfigurationException: HAPI-1511: Error in candidateSearchParams: Patient does not have a search parameter called 'general-practitioner'
at org.springframework.beans.factory.support.ConstructorResolver.instantiate(ConstructorResolver.java:658)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:486)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1352)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1195)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:582)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:542)
at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:335)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:234)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:333)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:213)
at org.springframework.boot.web.servlet.ServletContextInitializerBeans.getOrderedBeansOfType(ServletContextInitializerBeans.java:212)
at org.springframework.boot.web.servlet.ServletContextInitializerBeans.getOrderedBeansOfType(ServletContextInitializerBeans.java:203)
at org.springframework.boot.web.servlet.ServletContextInitializerBeans.addServletContextInitializerBeans(ServletContextInitializerBeans.java:97)
at org.springframework.boot.web.servlet.ServletContextInitializerBeans.<init>(ServletContextInitializerBeans.java:86)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.getServletContextInitializerBeans(ServletWebServerApplicationContext.java:260)
at org.springframework.boot.web.servlet.context.ServletWebServerApplicationContext.selfInitialize(ServletWebServerApplicationContext.java:234)
at org.springframework.boot.web.embedded.tomcat.TomcatStarter.onStartup(TomcatStarter.java:53)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5219)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1396)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1386)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.base/java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:145)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:919)
at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:835)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1396)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1386)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.base/java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:145)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:919)
at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:263)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardService.startInternal(StandardService.java:432)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:927)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.startup.Tomcat.start(Tomcat.java:486)
at org.springframework.boot.web.embedded.tomcat.TomcatWebServer.initialize(TomcatWebServer.java:123)
... 21 common frames omitted
It looks like you have mdm enabled, which may not work for DSTU2
This likely relates to https://github.com/hapifhir/hapi-fhir-jpaserver-starter/issues/339.