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installation failed

6

+ gcc version 10.3.0 (conda-forge 10.3.0-15) ``` cd extern/hdf5;\ mkdir build;\ ./configure --enable-threadsafe --disable-hl --prefix="/home/test/software/sigmap/extern/hdf5/build";\ make -j;\ make install /bin/sh: line 2: ./configure: No such file or directory ```

song-dq

Can I re-configure chunk size?

7

I think traditionally the real-time chunk size is 4000 samples(1 sec). But I'm doing some offline testing. Say all my input reads have > 2000 raw trimmed squiggle samples and...

harisankarsadasivan

1. Make sure you have GCC version > 8 [http://mirror.linux-ia64.org/gnu/gcc/releases/](http://mirror.linux-ia64.org/gnu/gcc/releases/) tar -xzvf gcc-version.tar.gz cd gcc-version ./contrib/dowload_prerequisites mkdir build cd build ../configure -enable-checking=release -enable-languages=c,c++ -disable-multilib make make install 2. install sigmap...

Saioyan

Higher throughputs with longer non-target reads

1

I'm trying to map reads (average length varied from 500 to 10000 raw squiggle samples) to a target of size 100Kb. I'm observing the following trend: the average throughput of...

harisankarsadasivan