Dan Handwerker

Calculating kappa and rho and the elbows goes back to Prantik's original 2012 pub: https://www.sciencedirect.com/science/article/abs/pii/S1053811911014303 My perspective on this isn't necessary how we calculate an elbow and more that kappa...

@katielamar has done this in her own branch. She might be at ISMRM this week presenting exactly this. She mentioned being being willing to open another PR to add this...

The preview of Katie's ISMRM abstract on this is here: https://submissions.mirasmart.com/ISMRM2025/Handlers/ViewTeaser.ashx?esbpgm=10207_2356

> Hi all, Thank you for sharing my presentation! I’m more than happy to open a pull request. [@handwerkerd](https://github.com/handwerkerd) , perhaps we can meet to discuss further? For my own...

I want to highlight that this is very similar to something we've talked about for a while. By adding the `--tree` option, this opens up our modularized decision tree code...

Hello. I was able to install from source based on your command above, but when I tried to import in an environment with `numpy>2.0` I get the error: ``` >>>...

That works. Thank you!

I think spatial concatenation before ICA only makes sense as part of a process to define alternate metrics to calculate T2* and S0 weighting. As mentioned in https://github.com/ME-ICA/tedana/issues/1023#issuecomment-1973589108 the original...

Prantik also recommended temporal concatenation in his version of MEICA and I was always a bit more skeptical. The benefit is, if we assuming the properties of data are consistent...

If an analysis is being done in a template space, afni_proc aligns data to that space before running tedana. If the data are in native space, then all runs are...