Genentech ID mismatch

[jlkravitz]

For those not using the provided python code to load the data, note that the file tcga_subtypes_id_map.csv maps a genentech ID to a patient ID of 2397, even though that doesn't exist in clinical.csv. I believe this is a mismatch and that that patient ID should be 2937, which does exist in clinical.csv.

[tavinathanson]

Yup, that's right. For those using the provided Python code, that is addressed in https://github.com/hammerlab/multi-omic-urothelial-anti-pdl1/blob/master/analyses/utils/data.py#L453