Potential source of validated somatic mutations

[hammer]

A recent Nature article on pancreatic cancer sequenced 382 patients from the Australian Pancreatic Cancer Genome Initiative (APGI) and found 23,538 high confidence coding mutations, of which, 7,377 were verified using orthogonal approaches. The data appears to be available from the ICGC data portal at https://dcc.icgc.org/projects/PACA-AU. We should see if we can get BAMs or FASTQs for the patients that have validated mutations!

[arahuja]

Another option is http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0151664

I've contacted the authors for access to the data as there were no details with the paper, hopefully this will be easier to obtain than the pancreatic set.

[hammer]

Another option: http://txcrb.org/open.html