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Published 20 hours ago • verified publisher icon hammerlab

Add comments and tests for Filters package

Open timodonnell opened this issue 10 years ago • 0 comments

Some classes could use some more explanation:

  • GenotypeFilter.scala - need a file-level header comment describing high-level idea
  • PileupFilter.scala - need file-level header comment. These filters seem to be filtering PileupElements, not Pileups. What is the difference between this and PileupElementsFilter.scala?
  • SomaticGenotypeFilter.scala - need file-level header comment
  • FishersExactTest - comment needed. Maybe move to a math utils file?

timodonnell avatar Nov 04 '14 01:11 timodonnell