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Search by gene name in pileup view

Open ihodes opened this issue 9 years ago • 2 comments

Use case:

KMT2D is mutated (at various points) in ~89% of follicular lymphoma. Can we interrogate this gene specifically (e.g. w less stringent filters)?

ihodes avatar Jun 24 '15 22:06 ihodes

Can you say more about why you'd want to do this in the pileup view, as opposed to via CQL:

annotations:gene_names = 'KMT2D'

danvk avatar Jun 24 '15 22:06 danvk

Definitely—the use-case is looking for evidence of a variant that wasn't called.

ihodes avatar Jun 24 '15 22:06 ihodes