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Published 20 hours ago • verified publisher icon hammerlab

Pileup.js should use the CycleDash API

Open danvk opened this issue 9 years ago • 0 comments

pileup currently fetches variants directly from the VCF file and alignments directly from the BAM file.

It would make more sense for it to pull in variants either via the API or by piggy-backing on the existing variant data flow within the examine page.

Fetching alignments will require the CycleDash API to support this, but it could be a big performance win over fetching & parsing BAM files in JavaScript.

danvk avatar Jun 04 '15 16:06 danvk