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Published 20 hours ago • verified publisher icon hall-lab

How to understand the output genotyped from svtyper?

Open xujinshengjsxu opened this issue 4 years ago • 0 comments

    I'm curious about the output from merge multiple samples using svtyper and lmerge. It seems like different from SNP vcf from GATK. How can I understand the REF (N), ALT (<DEL>) and genotype such as 0/0, 0/1. The situations are as follows.     Thanks a lot.

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xujinshengjsxu avatar Oct 13 '19 12:10 xujinshengjsxu