oceanspy
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Published
20 hours ago •
hainegroup
hainegroup
Progress bar for `animate.vertical_section*`
OceanSpy version: v0.2.0
Description
I was trying to animate a vertical section on the ECCO dataset with the function animate.vertical_section. It works fine, except that the output in the jupyter notebook shows a new progress bar for each percentage increment. This is mostly a cosmetic issue for the animate function. The reason I opened this issue is that this does not happen every time I run the animate function.
What I Did
ax = ellet_line_section.animate.vertical_section(
varName="V",
contourName="Sigma0",
robust=True,
cmap="coolwarm")
The output looks like this
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312it [07:36, 1.48s/it]
I think I know what the problem was. This can be fixed if I call a figure instance before invoking the animation. This way, the animate function doesn't create a new figure every time it iterates.
fig= plt.figure(figsize=(10, 4), frameon=True)
ax = ellet_line_section.animate.vertical_section(
varName="V",
contourName="Sigma0",
robust=True,
cmap="coolwarm")
doesn't give the same output. You simply get a single progress bar.
312it [07:34, 1.34s/it]
Good catch! I guess we could try to initialize the figure in animate if it isn't already. Maybe something like:
if not plt.get_fignums():
plt.figure()
I am still trying to figure out if this is an issue. That is, if after all this time, whether this remains an issue. I ran the following cell within Kogur.ipynb:
anim = od_surv.animate.vertical_section(
varName="ort_Vel",
contourName="Sigma0",
robust=True,
cmap="coolwarm",
display=True,
)
about 10 times. I also change the variable being plotted (tried Temp, S, U and V). I couldn't reproduce the behavior described by Ali. Not saying that this isn't an issue anymore. Just adding to this thread that I failed to reproduce the behavior.
I cannot reproduce this error because there is a different bug. Maybe I am doing something wrong, but the vertical section function (both animate and plot) are taking forever. It would be nice if someone has a working example that is very fast to run.
Some updates: it did run, but it was very very slow. Also, I didn't see any progressbar