Robert Haase
Robert Haase
Hey Martin, we were just again having some issues installing BioBeam on MacOS. Following things needed to be done/installed: * Install homebrew * Install Anaconda * `brew install gcc` *...
Can you guys make a concrete proposal how to make points visible, e.g. if a user does spot detection on a 2048x2048 large image? At the moment the points cannot...
> this is totally different Yeah sorry, I used 1000x1000 in my minimal-reproducible-example code snipped posted above, not 2048x2048. Thanks for pointing this out
> You suggest having point size independent of zoom factor. Maybe, I wasn't clear. I'm not talking about independence from zoom level. I proposed "The default size of points, when...
> 1. The field of view _definitey_ includes the zoom level, Sorry for using the wrong term here. I mean the area that was imaged (image size * voxel size)....
Just for the record: `experimental_canvas_size_limits` and `_alias` also don't offer a nice default size for points: ``` import napari import numpy as np viewer = napari.Viewer() viewer.add_image(np.zeros((1000,1000))) points_layer = viewer.add_points([(20,...
Sorry guys, that's all workarounds for a problem that should be resolved at the source: when points are added without size specification, napari core must make sure the points are...
> Otherwise, we bite the bullet and accept that layer init defaults depend on the viewer context Now I understand the problem you have on the viewer side! Thanks for...
> On your side you could change return style to `LayerData` an Not really. I'm talking about collections of (many) functions that return basic numpy types. Goal is to have...
... and it would be cool if napari-core would make sure that results of functions returning `PointsData` are visible to the user; ideally in a pleasing size neither half a...