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Published 20 hours ago • verified publisher icon haddocking

Presenting cluster information in tables and plots

Open SarahAlidoost opened this issue 1 year ago • 4 comments

The dataframes used for creating tables, scatter and box plots have three columns cluster-id, cluster-ranking and capri_rank. Here are two examples where there are Unclustered and Other groups in the dataframes:

      Cluster-id capri_rank cluster-ranking
0          -           1               -
1          -           1               -
2          -           1               -
3          -           1               -
4          -           1               -

        Cluster-id capri_rank  cluster-ranking
125      Other          11               11
129      Other          11               11
131      Other          11               11
92       Other          11               13
108      Other          11               13
109      Other          11               13
119      Other          11               13
111      Other          11               14
130      Other          11               14

The representation of data in plots and tables for these groups is not consistent. For example, a cluster with Cluster-id = "-" is called "Unclustered" in tables and in scatterplots whereas it is "-" in box plots and shown as capri_rank=1 in the x-axis of box plot. Another example, a cluster with Cluster-id="Other" is called "Other" in scatter plots and box plots legends whereas they are shown with cluster-ranking=11, 13, 14 in tables whereas it is shown as capri_rank=11 in the x-axis of box plot.

See more:

0 0 0 0_8000_docking-protein-protein_run1-test-branch_analysis_4_caprieval_analysis_report html

0 0 0 0_8000_docking-protein-protein_run1-test-branch_analysis_4_caprieval_analysis_report html (1)

0 0 0 0_8000_docking-protein-protein_run1-test-branch_analysis_4_caprieval_analysis_report html (2)

0 0 0 0_8000_docking-antibody-antigen_run1-CDR-NMR-CSP-test_analysis_04_caprieval_analysis_report html

0 0 0 0_8000_docking-antibody-antigen_run1-CDR-NMR-CSP-test_analysis_04_caprieval_analysis_report html (1)

SarahAlidoost avatar Jun 02 '23 11:06 SarahAlidoost