UnboundLocalError while trying the example from documentation

Open sowmyamanojna opened this issue 5 years ago • 2 comments

Thank you for the package. I am quite new to GEOparse and have been trying to figure out the basics of the package. I tried to implement the initial example provided on the documentation and get an Unbound Local Error. The screenshot of the same is as follows:

Python Version: 3.8.5 GEOparse Version: 2.0.2

Any leads about how to overcome this problem would be really helpful. Thanks!

Dec 10 '20 14:12 sowmyamanojna

Hi @sowmyamanojna, most probably the NCBI server changed something. Let me check it. Rafal

Dec 10 '20 15:12 guma44

This works for me. Did you try simply: curl ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE1nnn/GSE1563/soft/GSE1563_family.soft.gz

If you can't see that file from your machine using curl, you have some kind of network error unrelated to GEOparse.

May 17 '21 12:05 CholoTook