Functional annotation of the exchanged genes

[LucoDevro]

Hi Gerry,

I get that Panstripe's main goal is to model the gene exchange rates, but would it be straightforward to get an idea of the function of the exchanged genes? I'm thinking of listing annotations of genes with a non-zero chance of being exchanged according to the ASR embedded in Panstripe. (the anc_states variable in the main panstripe.R function). For example, I'd like to get a COG profile of the exchanged genes for each node.

Also, splitting this annotation profile out in gained and lost genes would be interesting as well, but you have already listed this as a possible enhancement (#10).

Thanks, Lucas