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Published 20 hours ago • verified publisher icon gtonkinhill

scripts/convert_refseq_to_prokka_gff.py produces only 1 chromosome output

Open martinastoycheva opened this issue 2 years ago • 4 comments

Hello,

I have a refseq gff that contains two chromosomes in it which I wanted to use in the panaroo pipeline. I tried using the script to convert it to a prokka gff but I get only the second chromosome in the output gff. Is this inteded behaviour?

Cheers, Martina

martinastoycheva avatar Mar 17 '22 17:03 martinastoycheva