Gregor Sturm
Gregor Sturm
Depends on #310
Hi @luozhy88, thanks for opening the issue! I was confused myself about the `--max_time` parameter, but [I learned on slack](https://nfcore.slack.com/archives/CE5LG7WMB/p1698928864473169) that it only represents an upper bound time limit processes...
Should be fixed in 2.5.x
@esamorodnitsky, which exact process ran into the time limit in your case?
That makes sense, cellbender is another process that could hit the runtime limit, especially when not running on GPU. Do you want to submit a PR to the pipeline config...
Eventually, yes.
I looked into this. In the past we had also cases of cellranger failing due to runtime limits. As a solution, we increased the default runtimes for all labels in...
Will be fixed as part of #276.
#276 has not been merged yet, this will be part of 2.7
Should be fixed in 2.7.0. If the issue persists please reopen/make a new ticket.