Gregory Lee
Gregory Lee
sorry about the long delay here. This has been updated for the V3 store paths used in Zarr >v2.12 and to remove the need for specifying `path` with v3 stores....
I am happy for someone to take over if possible. Thank you.
replaced by #420
Hi @monzelr, it would be great if you want to work on this. Yes, scikit-image 0.19 did start using Pythran, however there is still much more Cython-based code than Pythran...
I don't think Pythran is being used on the specific blob detection functions you asked about, though? I also don't see any large for loops in `_blob_overlap`, but think perhaps...
I would initially try converting all components to the GPU except for `_prune_blobs`, as the other parts look reasonably straightforward. That should still give a performance benefit over scikit-image even...
Oh, great, I didn't realize you already had something working. Please make a PR when you are ready and we can help review. > scikit-image version 1.1 (Python 3.6). 1.1...
Not `RawModule`, but I remembered that I did use the closely related `RawKernel` for ndimage [spline prefiltering](https://github.com/cupy/cupy/blob/master/cupyx/scipy/ndimage/_spline_prefilter_core.py#L261)
Ah, I see that the install docs don't yet list 1.6.0 as supported. I had that version because I am using recent Ubuntu 20.04 packages. I just tried with a...
updated the issue title to indicate that the issue seems to be cuTENSOR-1.6 specific