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Which other open source PALM/STORM application could benefit from Gpufit?

Open jkfindeisen opened this issue 7 years ago • 2 comments

Those fitting applications which could benefit from Gpufit (PALM, STORM, ... but not limited) help them using Gpufit. For example by forking and introducing Gpufit. This may include re-design since Gpufit needs the fits to be stored, then performed in one go, then then results need to be distributed.

jkfindeisen avatar Aug 10 '17 08:08 jkfindeisen

  • ThunderSTORM (https://github.com/zitmen/thunderstorm)

jkfindeisen avatar Aug 10 '17 08:08 jkfindeisen

Being able to speed up ThunderSTORM would indeed be great. It performs quite well in the SMLM challenge (http://bigwww.epfl.ch/smlm/index.html) but is rather slow, in particular with multiple peak fitting activated (which is in my hands, or more exactly on the computers I have access to, unusably slow).

cleterrier avatar Jan 04 '18 11:01 cleterrier