gffread
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Large genome or large chromosome
Hi,
I found that gffread (v0.12.7.) can not deal with large chromosomes, we may find minus coordinates when using gffread to deal with such large chromosomes, for example, for a genome here https://ftp.cngb.org/pub/CNSA/data5/CNP0003098/CNS0560369/CNA0050666/
when I ran
gffread -T -o file2.gtf MD.chromosome_level.gene.gff
I got many minus coordinates, what's wrong?
Best, Kun