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pseudo feature not filtered with `--no-pseudo` and `-F` options together

Open hermidalc opened this issue 2 years ago • 0 comments

Normally with gffread I've found that using --no-pseudo and -F that --no-pseudo still filters out all features with a pseudo=true attribute. But for this example:

https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/874/185/GCA_000874185.2_ViralProj20757/GCA_000874185.2_ViralProj20757_genomic.gff.gz

This feature with pseudo=true does not get filtered out for this feature:

AJ278322.4	EMBL	CDS	9713	14527	.	+	0	Parent=gene-ORF15;Note=putative product gp15b;gbkey=CDS;gene=ORF15;pseudo=true;transl_table=11

hermidalc avatar Nov 16 '22 17:11 hermidalc